Cytoscape is a cross-platform, open source application for visualization and analysis of networks. It is widely used in the field of Systems Biology to visualize different types of biological networks (like protein-protein interactions). It also has a plugin mechanism for extending its core functionality. Cytoscape is written in Java, so this open the possibility of using Processing to create Cytoscape plugins. I just put together a small template for creating Processing plugins for Cytoscape using Eclipse, keep reading for more details.
Archive for the ‘network’ Tag
I just created an account on 6pli, which is an application to create visual, networked representations of all the links in a del.icio.us account. It also allows to navigate through the links and open the pages they refer to.
This is the visualization of my links: http://www.6pli.com/codeanticode
It was created by the artistic collective bestiario.